Variant Query Results #

Here is an exhaustive list of all the fields of the patient query results table.

Variant results table #

Overview #

Description #

The results table lists all the variants matching the selected criteria using filters. It displays only partial comparable information between the variants. If a user clicks on a row, he/she will be redirected to the detailed page of the variant which displays more information about it.

When no filter is used, the table automatically lists all the variants (of interest) present in the database. Filters act as a way to narrow the search and keep only the variants of interest.

If one or multiple filters are selected, the content of the table gets updated to display only the matching patients.

Structure #

Each row of the table corresponds to a variant matching the search

Fields #

All the fields are listed below. Their goal is to give the user a quick list of comparable information between the patients. More detailed information can be found on the detailed page of a specific patient.

Variant type #

Sortable #

By clicking on the column name, the user sort the variant by ascending or descending order using the variant type.

Description #

The variant type refers to specific type of the variant.

Value #

Displays the variant type using coloured labels

Genomic position #

Sortable #

Missense variant
Stop gained
Stop lost
Start lost
Frameshift variant
Inframe variant
Inframe insertion
Inframe deletion
Splicing variant
Splice acceptor variant
Splice donor variant
Intron variant
Synonymous variant
Upstream gene variant
Downstream gene variant
5 prime UTR variant
3 prime UTR variant