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Journals and book articles
[36] Jon Ison, Hans Ienasescu, Piotr Chmura, Emil Rydza, Hervé Ménager, Matúš Kalaš, Veit Schwämmle, Björn Grüning, Niall Beard, Rodrigo Lopez, Severine Duvaud, Heinz Stockinger, Bengt Persson, Radka Svobodová Vařeková, Tomáš Raček, Jiří Vondrášek, Hedi Peterson, Ahto Salumets, Inge Jonassen, Rob Hooft, Tommi Nyrönen, Alfonso Valencia, Salvador Capella, Josep Gelpí, Federico Zambelli, Babis Savakis, Brane Leskošek, Kristoffer Rapacki, Christophe Blanchet, Rafael Jimenez, Arlindo Oliveira, Gert Vriend, Olivier Collin, Jacques van Helden, Peter Løngreen, Søren Brunak. The bio.tools registry of software tools and data resources for the life sciences, Genome Biology, 20(1):164, 2019.
[35] Ana Claudia Sima, Tarcisio Mendes de Farias, Erich Zbinden, Maria Anisimova, Manuel Gil, Heinz Stockinger, Kurt Stockinger, Marc Robinson-Rechavi, Christophe Dessimoz. Enabling Semantic Queries Across Federated Bioinformatics Databases, Database, Volume 2019.
[34] Marc Fiume, Miroslav Cupak, Stephen Keenan, Jordi Rambla, Sabela de la Torre, Stephanie O. M. Dyke, Anthony J. Brookes, Knox Carey, David Lloyd, Peter Goodhand, Maximilian Haeussler, Michael Baudis, Heinz Stockinger, Lena Dolman, Ilkka Lappalainen, Juha Törnroos, Mikael Linden, J. Dylan Spalding, Saif Ur-Rehman, Angela Page, Paul Flicek, Stephen Sherry, David Haussler, Susheel Varma, Gary Saunders, Serena Scollen. Federated discovery and sharing of genomic data using Beacons. Nature Biotechnology, 37:220–224, 2019.
[33] Rachel Drysdale, Charles E. Cook, Robert Petryszak, Vivienne Baillie-Gerritsen, Mary Barlow, Elisabeth Gasteiger, Franziska Gruhl, Jürgen Haas, Jerry Lanfear, Rodrigo Lopez, Nicole Redaschi, Heinz Stockinger, Daniel Teixeira, Aravind Venkatesan, ELIXIR Core Data Resource Forum, Niklas Blomberg, Christine Durinx, Johanna McEntyre. The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences, bioRxiv, 5 Apr 2019.
[32] Panu Artimo, Séverine Duvaud, Mikhail Pachkov, Vassilios Ioannidis, Erik van Nimwegen, Heinz Stockinger. The ISMARA client [version 1; referees: awaiting peer review], F1000Research, 5(ELIXIR):2851, 2016.
[31] Christine Durinx, Jo McEntyre, Ron Appel, Rolf Apweiler, Mary Barlow, Niklas Blomberg, Chuck Cook, Elisabeth Gasteiger, Jee-Hyub Kim, Rodrigo Lopez, Nicole Redaschi, Heinz Stockinger, Daniel Teixeira, Alfonso Valencia. Identifying ELIXIR Core Data Resources. F1000Research, 5(ELIXIR):2422, 2016.
[30] SIB Swiss Institute of Bioinformatics Members. The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases. Nucleic Acids Res, 44(D1):D27-D37, 2016.
[29] Jon Ison, Kristoffer Rapacki, Hervé Ménager, Matúš Kalaš, Emil Rydza, Piotr Chmura, Christian Anthon, Niall Beard, Karel Berka, Dan Bolser, Tim Booth, Anthony Bretaudeau, Jan Brezovsky, Rita Casadio, Gianni Cesareni, Frederik Coppens, Michael Cornell, Gianmauro Cuccuru, Kristian Davidsen, Gianluca Della Vedova, Tunca Dogan, Olivia Doppelt-Azeroual, Laura Emery, Elisabeth Gasteiger, Thomas Gatter, Tatyana Goldberg, Marie Grosjean, Björn Grüning, Manuela Helmer-Citterich, Hans Ienasescu, Vassilios Ioannidis, Martin Closter Jespersen, Rafael Jimenez, Nick Juty, Peter Juvan, Maximilian Koch, Camille Laibe, Jing-Woei Li, Luana Licata, Fabien Mareuil, Ivan Mičetić, Rune Møllegaard Friborg, Sebastien Moretti, Chris Morris, Steffen Möller, Aleksandra Nenadic, Hedi Peterson, Giuseppe Profiti, Peter Rice, Paolo Romano, Paola Roncaglia, Rabie Saidi, Andrea Schafferhans, Veit Schwämmle, Callum Smith, Maria Maddalena Sperotto, Heinz Stockinger, Radka Svobodová Vařeková, Silvio C.E. Tosatto, Victor de la Torre, Paolo Uva, Allegra Via, Guy Yachdav, Federico Zambelli, Gert Vriend, Burkhard Rost, Helen Parkinson, Peter Løngreen and Søren Brunak. Tools and data services registry: a community effort to document bioinformatics resources. Nucleic Acids Res, 44(D1):D38-D47, 2016.
[28] Linda Dib, Xavier Meyer, Panu Artimo, Vassilios Ioannidis, Heinz Stockinger, Nicolas Salamin. Coev-web: a web platform designed to simulate and evaluate coevolving positions along a phylogenetic tree. BMC Bioinformatics, 16:394, 2015.
[27] Elke Schaper, Alexander Korsunsky, Julija Pecerska, Antonio Messina, Riccardo Murri, Heinz Stockinger, Stefan Zoller, Ioannis Xenarios, Maria Anisimova. TRAL: tandem repeat annotation library. Bioinformatics, 31(18):3051-3053, 2015.
[26] Heinz Stockinger, Adrian Altenhoff, Konstantin Arnold, Amos Bairoch, Frederic Bastian, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane, Philippe Le Mercier, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi, Jacques Rougemont, Torsten Schwede, Christian von Mering, Erik van Nimwegen, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel. Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res, 42(Web Server issue):W436-41, 2014.
[25] Mario Valle, Hannes Schabauer,Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Nicolas Salamin. Optimization strategies for fast detection of positive selection on phylogenetic trees, Bioinformatics 30(8):1129-1137, 2014.
[24] Sébastien Moretti, Balazs Laurenczy, Walid H. Gharib, Briséïs Castella, Arnold Kuzniar, Hannes Schabauer, Romain A. Studer, Mario Valle, Nicolas Salamin, Heinz Stockinger, and Marc Robinson-Rechavi. Selectome update: quality control and computational improvements to a database of positive selection, Nucleic Acids Research, Oxford University Press, gkt1065v1-gkt1065, 2013.
[23] Panu Artimo, Manohar Jonnalagedda, Konstantin Arnold, Delphine Baratin, Gabor Csardi, Edouard de Castro, Severine Duvaud, Volker Flegel, Arnaud Fortier, Elisabeth Gasteiger, Aurelien Grosdidier, Celine Hernandez, Vassilios Ioannidis, Dmitry Kuznetsov, Robin Liechti, Sebastien Moretti, Khaled Mostaguir, Nicole Redaschi, Gregoire Rossier, Ioannis Xenarios, Heinz Stockinger. ExPASy: SIB bioinformatics resource portal, Nucleic Acids Research, Oxford University Press, 40(W1):W597-W603, 2012.
[22] Yannick Wurm, John Wang, Oksana Riba-Grognuz, Miguel Corona, Sanne Nygaard, Brendan G. Hunt, Krista K. Ingram, Laurent Falquet, Mingkwan Nipitwattanaphon, Dietrich Gotzek, Michiel B. Dijkstra, Jan Oettler, Fabien Comtesse, Cheng-Jen Shih, Wen-Jer Wu, Chin-Cheng Yang, Jerome Thomas, Emmanuel Beaudoing, Sylvain Pradervand, Volker Flegel, Erin D. Cook, Roberto Fabbretti, Heinz Stockinger, Li Long, William G. Farmerie, Jane Oakey, Jacobus J. Boomsma, Pekka Pamilo, Soojin V. Yi, Jürgen Heinze, Michael A. D. Goodisman, Laurent Farinelli, Keith Harshman, Nicolas Hulo, Lorenzo Cerutti, Ioannis Xenarios, DeWayne Shoemaker, Laurent Keller, The genome of the fire ant Solenopsis invicta, PNAS, 108(14):5679-5684, April 5, 2011.
[21] Thorsten Kleinjung, Joppe W. Bos, Arjen K. Lenstra, Dag Arne Osvik, Kazumaro Aoki, Scott Contini, Jens Franke, Emmanuel Thomé, Pascal Jermini, Michela Thiémard, Paul Leyland, Peter L. Montgomery, Andrey Timofeev, Heinz Stockinger. A heterogeneous computing environment to solve the 768-bit RSA challenge, Cluster Computing, December 24, 2010.
[20] Steve Pettifer, Jon Ison, Matus Kalas, Dave Thorne, Philip McDermott, Inge Jonassen, Ali Liaquat, Jose M. Fernandez, Jose M. Rodriguez, David G. Pisano, Jean Salzemann, Christophe Blanchet, Vincent Breton, Mahmut Uludag, Peter Rice, Edita Bartaseviciute, Kristoffer Rapacki, Maarten Hekkelman, Oliver Sand, Heinz Stockinger, Andrew B. Clegg, Erik Bongcam-Rudloff, Teresa K. Attwood, Graham Cameron, and Gert Vriend. The EMBRACE Web Service Collection. Nucleic Acids Research, 38(Web Server issue):W683-W688, Oxford University Press, 2010.
[19] Gianni Pucciani, Andrea Domenici, Flavia Donno, Heinz Stockinger. A Performance Study on the Synchronisation of Heterogeneous Grid Databases Using CONStanza. Future Generation Computer Systems, Elsevier, 26(6):820-834, 2010.
[18] Robbie Joosten, Jean Salzemann, Vincent Bloch, Heinz Stockinger, Ann-Charlott Berglund, Christophe Blanchet, Erik Bongcam-Rudloff, Christophe Combet, Ana Da Costa, Gilbert Deleage, Matteo Diarena, Roberto Fabbretti, Geraldine Fettahi, Volker Flegel, Andreas Gisel, Vinod Kasam, Timo Kervinen, Eija Korpelainen, Kimmo Mattila, Marco Pagni, Matthieu Reichstadt, Vincent Breton, Ian Ticklei and Gert Vriend. PDB_REDO: automated re-refinement of X-ray structure models in the PDB, Journal of Applied Cristallography, 42:376-384, 2009.
[17] Andreas Quandt, Sergio Maffioletti, Cesare Pautasso, Heinz Stockinger, Frederique Lisacek, Peter Kunszt. High-throughput Data Analysis of Proteomic Mass Spectra on the SwissBioGrid, Handbook of Research in Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, IGI Global, 2009.
[16] Heinz Stockinger, Alexander F. Auch, Markus Göker, Jan Meier-Kolthoff, Alexandros Stamatakis. Large-Scale Co-Phylogenetic Analysis on the Grid, International Journal of Grid and High Performance Computing, IGI Publishing, 1(1):39-54, 2009.
[15] Gianni Pucciani, Flavia Donno, Andrea Domenici, Heinz Stockinger. Consistency of Replicated Datasets in Grid Computing, Handbook of Research on Grid Technologies and Utility Computing: Concepts for Managing Large-Scale Applications, Information Science Reference, 2009.
[14] Heinz Stockinger, Teresa Attwood, Shahid Nadeem Chohan, Richard Côté, Philippe Cudré-Mauroux, Laurent Falquet, Pedro Fernandes, Robert D. Finn, Taavi Hupponen, Eija Korpelainen, Alberto Labarga, Aurelie Laugraud, Tania Lima, Evangelos Pafilis, Marco Pagni, Steve Pettifer, Isabelle Phan, Nazim Rahman. Experience Using Web Services for Biological Sequence Analysis, Briefings in Bioinformatics, Oxford University Press, 9(6):493-505, 2008.
[13] Heinz Stockinger. Applying Scientific Applications to the Grid. In Grid Computing Research Progress, Nova Publishers, ISBN 978-1-60456-404-4, 2nd Quarter, 2008.
[12] Heinz Stockinger et al. Defining the Grid: A Snapshot on the Current View, Journal of Supercomputing, Springer Verlag, 42(1):3-17, 2007.
[11] Richard McClatchey, Ashiq Anjum, Heinz Stockinger, Arshad Ali, Ian Willers, Michael Thomas. Data Intensive and Network Aware (DIANA) Grid Scheduling, Journal of Grid Computing, Springer Verlag, 5(1):43-64, 2007.
[10] Heinz Stockinger. Grid Computing: A Critical Discussion on Business Applicability. IEEE Distributed Systems Online, 7(6), art. no. 0606-o6002, 2006.
[9] J. Andreeva, A. Anjum, T. Barrass, D. Bonacorsi, J. Bunn, P. Capiluppi, M. Corvo, N. Darmenov, N. De Filippis, F. Donno, G. Donvito, G. Eulisse, A. Fanfani, F. Fanzago, A. Filine, C. Grandi, J. M. Hernández, V. Innocente, A. Jan, S. Lacaprara, I. Legrand, S. Metson, H. Newman, D. Newbold, A. Pierro, L. Silvestris, C. Steenberg, H. Stockinger, L. Taylor, M. Thomas, L. Tuura, T. Wildish, and F. Van Lingen. Distributed Computing Grid Experiences in CMS, IEEE Transactions on Nuclear Science, 52(4):884-890, Aug. 2005.
[8] Peter Kunszt, Erwin Laure, Heinz Stockinger, and Kurt Stockinger. File-based Replica Management, Future Generation Computer Systems (FGCS), Elsevier, 22(1):115-123, 2005.
[7] Erwin Laure, Heinz Stockinger, Kurt Stockinger. Performance Engineering in Data Grids, Concurrency and Computation: Practice and Experience, Wiley Press, 17(2-4):171-191, 2005.
[6] David Cameron, James Casey, Leanne Guy, Peter Kunszt, Sophie Lemaitre, Gavin McCance, Heinz Stockinger, Kurt Stockinger, Giuseppe Andronico, William Bell, Itzhak Ben-Akiva, Diana Bosio, Radovan Chytracek, Andrea Domenici, Flavia Donno, Wolfgang Hoschek, Erwin Laure, Levi Lucio, Paul Millar, Livio Salconi, Ben Segal, Mika Silander Replica Management in the EU DataGrid Project, International Journal of Grid Computing, Springer Science+Business Media B.V., Formerly Kluwer Academic Publishers B.V., 2(4):341-351, 2004.
[5] Heinz Stockinger, Asad Samar, Shahzad Muzaffar, and Flavia Donno. Grid Data Mirroring Package (GDMP). Scientific Programming Journal - Special Issue: Grid Computing, IOS Press, 10(2):121-134, 2002.
[4] Heinz Stockinger, Asad Samar, Bill Allcock, Ian Foster, Koen Holtman, and Brian Tierney. File and Object Replication in Data Grids. Journal of Cluster Computing, Kluwer Academic Publishers, 5(3):305-314, 2002.
[3] Rajkumar Buyya, David Abramson, Jonathan Giddy, and Heinz Stockinger. Economic Models for Resource Management and Scheduling in Grid Computing. Special Issue on Grid Computing Environments, The Journal of Concurrency and Computation: Practice and Experience (CCPE), Wiley Press, 14(13-15):1507-1542, 2002.
[2] Koen Holtman, Heinz Stockinger, Building a Large Location Table to Find Replicas of Physics Objects, Journal of Computer Physics Communications, Elsevier, 140:146-152, 2001.
[1] Erich Schikuta and Heinz Stockinger. Parallel I/O: Methodologies and Systems. in High Performance Cluster Computing. Prentice Hall, 1999.


International conferences and workshops
2013
[41] Peter Kunszt, Sergio Maffioletti, Dean Flanders, Markus Eurich, Thomas Bohnert, Andrew Edmonds, Heinz Stockinger, Sigve Haug, Almerina Jamakovic-Kapic, Placi Flury, Simon Leinen, Eryk Schiller. Towards a Swiss National Research Infrastructure. Federative and interoperable cloud infrastructures (FedICI) (in conjunction with Euro-PAR), Aachen, Germany, August 26, 2013.
2012
[40] Hannes Schabauer, Mario Valle, Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Ziheng Yang, Nicolas Salamin. SlimCodeML: An Optimized Version of CodeML for the Branch-Site Model. 11th IEEE International Workshop on High Performance Computational Biology, Shanghai, China, May 21, 2012.
[39] Sébastien Moretti, Riccardo Murri, Sergio Maffioletti, Arnold Kuzniar, Briseis Castella, Nicolas Salamin, Marc Robinson-Rechavi, Heinz Stockinger. gcodeml: A Grid-enabled Tool for Detecting Positive Selection in Biological Evolution. HealthGrid Conference, Amsterdam, The Netherlands, May 21-23, 2012.
2010
[38] Adam Kraut, Sébastien Moretti, Marc Robinson-Rechavi, Heinz Stockinger and Dean Flanders. Phylogenetic Code in the Cloud - Can it Meet the Expectations? 8th HealthGrid Conference, Paris, France, June 28-30, 2010.
2009
[37] Heinz Stockinger, Nabil Abdennadher, Dean Flanders, Placi Flury, Sigve Haug, Pierre Kuonen, Francesco Lelli, Sergio Maffioletti, Alessandro Usai, Christoph Witzig. The Swiss National Grid Association and its Experience on a National Grid Infrastructure. Austrian Grid Symposium, OCG Verlag, Linz, Austria, Sep. 28-29, 2009.
2008
[36] Marco Pagni, Jörg Hau, Heinz Stockinger. A Multi-Protocol Bioinformatics Web Service: Use SOAP, Take a REST or Go With HTML. International Workshop of Modern Computer Tools for the Biosciences - a Grid Perspective (MBIO08), IEEE Computer Society Press, Lyon, France, May 19-22, 2008.
[35] Nabil Abdennadher, Peter Engel, Derek Feichtinger, Dean Flanders, Placi Flury, Sigve Haug, Pascal Jermini, Sergio Maffioletti, Cesare Pautasso, Heinz Stockinger, Wibke Sudholt, Michela Thiemard, Nadya Williams, Christoph Witzig. Initializing a National Grid Infrastructure - Lessons Learned from the Swiss National Grid Association Seed Project. 8th IEEE International Symposium on Cluster Computing and the Grid (CCGrid2008), IEEE Computer Society Press, Lyon, France, May 19-22, 2008.
2006
[34] Heinz Stockinger. Grid Computing in Physics and Life Sciences (invited plenary talk). 18th International Conference on Computer, Information and Systems Science and Engineering (CISE), World Enformatica Society, Vienna, Austria, Dec. 16-18, 2006.
[33] Heinz Stockinger, Marco Pagni, Lorenzo Cerutti, Laurent Falquet. Grid Approach to Embarrassingly Parallel CPU-Intensive Bioinformatics Problems. 2nd IEEE International Conference on e-Science and Grid Computing (e-Science 2006), IEEE Computer Society Press, Amsterdam, The Netherlands, Dec. 4-6, 2006.
[32] Ashiq Anjum, Richard McClatchey, Heinz Stockinger, Arshad Ali, Ian Willers, Michael Thomas, Muhammad Sagheer, Khawar Hasham, Omer Alvi. DIANA Scheduling Hierarchies for Optimizing Grid Bulk Job Scheduling. 2nd IEEE International Conference on e-Science and Grid Computing (e-Science 2006), IEEE Computer Society Press, Amsterdam, The Netherlands, Dec. 4-6, 2006.
[31] Michael Podvinec, Sergio Maffioletti, Peter Kunszt, Konstantin Arnold, Lorenzo Cerutti, Bruno Nyffeler, Ralph Schlapbach, Can Türker, Heinz Stockinger, Arthur J. Thomas, Manuel C. Peitsch, Torsten Schwede. The SwissBioGrid Project: Objectives, Preliminary Results and Lessons Learned. 2nd IEEE International Conference on e-Science and Grid Computing (e-Science 2006) - Workshop on Production Grids, IEEE Computer Society Press, Amsterdam, The Netherlands, Dec. 4-6, 2006.
[30] Andrea Domenici, Flavia Donno, Gianni Pucciani, Heinz Stockinger. Relaxed Data Consistency with CONStanza, 6th IEEE International Symposium on Cluster Computing and the Grid (CCGrid2006), IEEE Computer Society Press, Singapore, May 16-19, 2006.
[29] Ezio Corso, Stefano Cozzini, Flavia Donno, Antonia Ghiselli, Luca Magnoni, Mirco Mazzucato, Riccardo Murri, Pier-Paolo Ricci, Heinz Stockinger, Alessio Terpin, Vinzenzo Vagnoni, Riccardo Zapi. StoRM, an SRM Implementation for LHC Analysis Farms, Computing in High Energy Physics (CHEP 2006), Mumbai, India, Feb. 13-17, 2006.
2005
[28] Erich Schikuta, Flavia Donno, Heinz Stockinger, Elisabeth Vinek, Helmut Wanek, Thomas Weishäupl, Christoph Witzany. Business In the Grid: Project Results, 1st Austrian Grid Symposium, OCG Verlag, Hagenberg, Austria, December 1-2, 2005.
[27] Heinz Stockinger, Flavia Donno, Giulio Eulisse, Mirco Mazzucato, Conrad Steenberg. Matchmaking, Datasets and Physics Analysis , Workshop on Web and Grid Services for Scientific Data Analysis (WAGSSDA), IEEE Computer Society Press, Oslo, Norway, June 14, 2005.
[26] Thomas Weishäupl, Flavia Donno, Erich Schikuta, Heinz Stockinger, Helmut Wanek. Business In the Grid: The BIG Project, 2nd International Workshop on Grid Economics and Business Models (GECON2005), Seoul, Korea, March 13, 2005.
2004
[25] J. Andreeva, A. Anjum, T. Barrass, D. Bonacorsi, J. Bunn, M. Corvo , N. Darmenov, N. De Filippis, F. Donno, G. Donvito, G. Eulisse, A. Fanfani, F. Fanzago, A. Filine, C. Grandi, J.M. Hernández, V. Innocente, A. Jan, S. Lacaprara, I. Legrand, S. Metson, H. Newman, A. Pierro, L. Silvestris, C. Steenberg, H. Stockinger, L. Taylor, M. Thomas, L. Tuura, T. Wildish, F. Van Lingen. Use of Grid Tools to Support CMS Distributed Analysis, IEEE Nuclear Science Symposium, IEEE Computer Society Press, Rome, Italy, October 16 - 22, 2004.
[24] Andrew Hanushevsky, Heinz Stockinger. A Proxy Service for the xrootd Data Server - (Springer version). 1st International Workshop on Scientific Applications on Grid Computing (SAG2004), IEEE Computer Society Press, Beijing, China, Sept. 20 - 24, 2004.
[23] Heinz Stockinger, Flavia Donno, Roberto Puccinelli, Kurt Stockinger. Data Grid Tutorials with Hands-on Experience. 1st International Workshop on Grid Education (Grid.Edu 2004), IEEE Computer Society Press, Chicago, Illinois, April 19-22, 2004.
[22] A. Shoshani, P. Kunszt, H. Stockinger, K. Stockinger, E. Laure, JP. Baud, J. Jensen, E. Knezo, S. Occhetti, O. Synge, O. Barring, B. Hess, A. Kowalski, C. Watson, D. Petravick, T. Perelmutov, R. Wellner, J. Gu, and Alex Sim. Storage Resource Management: Concepts, Functionality, and Interface Specification Future of Grid Data Environments: A Global Grid Forum (GGF) Data Area Workshop, Berlin, Germany, March 9, 2004.
[21] Paul Graham, Matti Heikkurinen, Jarek Nabrzyski,  Ariel Oleksiak, Mark Parsons, Heinz Stockinger, Kurt Stockinger, Maciej Stroinski, Jan Weglarz. EU Funded Grid Development in Europe. 2nd Europen Across Grids Conference, Springer Verlag, Nicosia, Cyprus, Jan. 28-30, 2004.
2003
[20] Andrea Domenici, Flavia Donno, Gianni Pucciani, Heinz Stockinger, Kurt Stockinger. Replica Consistency in a Data Grid. IX International Workshop on Advanced Computing and Analysis Techniques in Physics Research (ACAT03), Elsevier, Tsukuba, Japan, Dec. 1-5, 2003.
[19] Kurt Stockinger, Heinz Stockinger, Lukasz Dutka, Renata Slota, Darin Nikolow, and Jacek Kitowski. Access Cost Estimation for Unified Grid Storage Systems. In 4th International Workshop on Grid Computing (Grid2003), Phoenix, Arizona, November 17, 2003. IEEE Computer Society Press.
[18] Peter Kunszt, Erwin Laure, Heinz Stockinger, and Kurt Stockinger. Advanced Replica Management with Reptor. In 5th International Conference on Parallel Processing and Applied Mathematics, Springer Verlag, Czestochowa, Poland, September 7-10, 2003.
[17] Heinz Stockinger, Flavia Donno, Erwin Laure, Shazhad Muzaffar, Giuseppe Andronico, Peter Kunszt, Paul Millar. Grid Data Management in Action: Experience in Running and Supporting Data Management Services in the EU DataGrid Project. (ppt) Computing in High Energy Physics (CHEP 2003), La Jolla, California, March 24 - 28, 2003.
[16] James Casey, Diana Bosio, Leanne Guy, Joni Hahkala, Peter Kunszt, Erwin Laure,Gavin McCance, Olle Mulmo, Heinz Stockinger, Kurt Stockinger, Giuseppe Andronico, William Bell, David Cameron, Ruben Carvajal-Schiaffino, Federico DiCarlo, Andrea Domenici, Wolfgang Hoschek, Niklas Karlsson, Paul Millar, Ville Nenonen, Livio Salconi, Mika Silander, Gian-Luca Volpato, Floriano Zini. Next-Generation EU DataGrid Data Management Services, (ppt) Computing in High Energy Physics (CHEP 2003), La Jolla, California, March 24 - 28, 2003.
2002
[15] Ann Chervenak, Ewa Deelman, Ian Foster, Leanne Guy, Wolfgang Hoschek, Adriana Iamnitchi, Carl Kesselman, Peter Kunszt, Matei Ripeanu, Bob Schwarz, Heinz Stockinger,Kurt Stockinger, and Brian Tierney. Giggle: A Framework for Constructing Scalable Replica Location Services. In Proc. of the Int'l. ACM/IEEE Supercomputing Conference (SC 2002), IEEE Computer Society Press, Baltimore, Mayland, November 16-22, 2002.
[14] Heinz Stockinger, Andrew Hanushevsky. HTTP Redirection for Replica Catalogue Lookups in Data Grids. ACM Symposium on Applied Computing (SAC2002), ACM Press, Madrid, Spain, March 10-14, 2002.
2001
[13] Heinz Stockinger, Asad Samar, Bill Allcock, Ian Foster, Koen Holtman, Brian Tierney. File and Object Replication in Data Grids, 10th IEEE Symposium on High Performance and Distributed Computing (HPDC-10) , IEEE Computer Society Press, San Francisco, California, August 7-9, 2001.
[12] Dirk Düllmann, Wolfgang Hoschek, Javier Jean-Martinez, Asad Samar, Heinz Stockinger, Kurt Stockinger.Models for Replica Synchronisation and Consistency in a Data Grid, 10th IEEE Symposium on High Performance and Distributed Computing (HPDC-10) , IEEE Computer Society Press, San Francisco, California, August 7-9, 2001.
[11] Rajkumar Buyya, Heinz Stockinger, Jonathan Giddy, David Abramson. Economic Models for Management of Resources in Peer-to-Peer and Grid Computing, Commercial Applications for High-Performance Computing, SPIE's International Symposium on The Convergence of Information Technologies and Communications (ITCom 2001), Denver, Colorado, August 20-24, 2001. 
[10] Heinz Stockinger, Omer F. Rana, Reagan Moore, Andre Merzky. Data Management in a Grid Environment, European High Performance Computing & Networking Conference (HPCN2001), Springer Verlag, Amsterdam, The Nederlands, June 25 - 27, 2001. 
[9] Heinz Stockinger. Distributed Database Management Systems and the Data Grid. 18th IEEE Symposium on Mass Storage Systems and 9th NASA Goddard Conference on Mass Storage Systems and Technologies, IEEE Computer Society Press, San Diego, California, April 17-20, 2001.
[8] Asad Samar, Heinz Stockinger.  Grid Data Management Pilot (GDMP): A Tool for Wide Area Replication, IASTED International Conference on Applied Informatics (AI2001), Innsbruck, Austria, February 19-22, 2001.
[7] Luciano Serafini, Heinz Stockinger, Kurt Stockinger, Floriano Zini. Agent-Based Query Optimisation in a Grid Environment, IASTED International Conference on Applied Informatics (AI2001), Innsbruck, Austria, February 19 - 22, 2001.
[6] Heinz Stockinger, Kurt Stockinger, Erich Schikuta, Ian Willers. Towards a Cost Model for Distributed and Replicated Data Stores, 9th Euromicro Workshop on Parallel and Distributed Processing PDP 2001,  IEEE Computer Society Press, Mantova, Italy, February 7-9, 2001.
2000
[5] Wolfgang Hoschek, Javier Jaen-Martinez, Asad Samar, Heinz Stockinger, Kurt Stockinger, Data Management in an International Data Grid Project,  1st IEEE/ACM International Workshop on Grid Computing (Grid'2000), Springer Verlag, Bangalore, India, 17-20 Dec. 2000. ("distinguished paper" award)
[4] Nassem Bhatti, Jean-Marie Le Goff, Waseem Hassan, Zsolt Kovacs, Richard Peter Martin, McClatchey, Heinz Stockinger, Ian Willers, Object Serialisation and Deserialisation Using XML, 10th International Conference on Management of Data (COMAD 2000), Pune, India, 14 -16 December 2000.
[3] Mehnaz Hafeez, Asad Samar, Heinz Stockinger, A Data Grid Prototype for Distributed Data Production in CMS, VII International Workshop  on Advanced Computing  and  Analysis  Techniques in  Physics Research (ACAT2000), October 2000.
[2] Koen Holtman, Heinz Stockinger, Building a Large Location Table to Find Replicas of Physics Objects, (long version) Proc. of Computing in High Energy Physics (CHEP 2000), Padova, Febr. 2000.
1998
[1] Heinz Stockinger. Classification of Parallel Input/Output Products, Proc. of the International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA'98), Las Vegas, USA, July 13-16, 1998. 


Technical Reports / White Papers
[11] Heinz Stockinger, Mary Barlow, Chuck Cook, Rachel Drysdale, Elisabeth Gasteiger, Jee-Hyub Kim, Rodrigo Lopez, Nicole Redaschi, Daniel Teixeira, Christine Durinx, Johanna McEntyre. Plan for collation of metrics and quality data at the ELIXIR Hub, DOI 10.5281/zenodo.1194122, March 2018.
[10] Andrea Domenici, Flavia Donno, Gianni Pucciani, Heinz Stockinger CONStanza: Data Replication with Relaxed Consisteny, INFN/TC-06/06, 1 March 2006.
[9] Flavia Donno, Heinz Stockinger, Serge Robe, Eric Circlaeys. CERN's LHC Grid Software on Mac OS X, White Paper, October 2005.
[8] Sergio Andreozzi, Daniele Bonaccorsi, Vincenzo Ciaschini, Alessandro Cavalli, Flavia Donno, Sergio Fantinel, Federica Fanzago, Antonia Ghiselli, Alessandro Italiano,Mirco Mazzucato, Andrea Sciaba, Heinz Stockinger, Gennaro Tortone, Marco Verlato, Cristina Vistoli. Pilot Production Grid Infrastructure For High Energy Physics Applications, LFN-SIS Pubblication, INFN/TC-04/15, September 6, 2004.
[7] Fabrizio Gagliardi, Paul Graham, Matti Heikkurinen, Jarek Nabrzyski, Ariel Oleksiak, Mark Parsons, Heinz Stockinger, Kurt Stockinger, Maciej Stroinski, Jan Weglarz. IST Grid Projects' Inventory and Roadmap, April 2004.
[6] Leanne Guy, Erwin Laure, Peter Kunszt, Heinz Stockinger, and Kurt Stockinger. Replica Management in Data Grids. Technical report, Global Grid Forum Informational Document, GGF5, Edinburgh, Scotland, July 2002.
[5] Ann Chervenak, Ewa Deelman, Ian Foster, Wolfgang Hoschek, Adriana Iamnitchi, Carl Kesselman, Peter Kunszt, Matei Ripeanu, Heinz Stockinger Kurt Stockinger, and Brian Tierney. Giggle: A Framework for Constructing Scalable Replica Location Services. Technical report, Global Grid Forum Working Draft, GGF4, Toronto, Canada, February 2002.
[4] Heinz Stockinger, Asad Samar, Shahzad Muzaffar, Flavia Donno, and Andrea Domenici. GDMP (Grid Data Mirroring Package). Technical report, Global Grid Forum 3, Frascati, Italy, October 2001.
[3] Muhammad Anzar Afaq, Syed Shafqat Saeed, Heinz Stockinger, Object Oriented Database Serialization Using Extensible Markup Language, XML, CMS Internal Note 1999/051, November 1999.
[2] Heinz Stockinger, Data Replication in Distributed Database Systems, CMS Note 1999/046, July 1999.
[1] Erich Schikuta, Helmut Wanek, Heinz Stockinger,  Kurt Stockinger, Thomas Fuerle, Oliver Jorns, Christoph Loeffelhardt, Peter Brezany, Minh Dang, and Thomas Mueck. Vienna Input Output System (ViPIOS). Report for Research Project P11006-MAT. 


Habilitation Thesis, title: Privatdozent (Priv.-Doz.)
Heinz Stockinger. Data Management in Data Grids - Habilitation Overview, Research Lab for Computational Technologies and Applications, Faculty of Computer Science, University of Vienna, Austria, May 2005. 
Ph.D. Thesis, title: Doctor
Heinz Stockinger. Database Replication in World-Wide Distributed Data Grids.  (ps.gz| pdf) Institute of Computer Science and Business Informatics, University of Vienna, Austria, November 2001. 
Master's Thesis, title: Magister
Heinz Stockinger. Dictionary on Parallel I/O. Master's Thesis, Dept. of Data Engineering, University of Vienna, Austria, February 1998.